Estimating divergence times

DOI10.1016/0040-5809(88)90026-3MaRDI QIDQ1109710zbMATH OpenOpenAlexFDO

Authors Septiadi Padmadisastra

Publication date 1988

Published in Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/0040-5809(88)90026-3

zbMATH Keywords

phylogenetic treemethod of momentsmaximum likelihood methodsimulation studiestree topologyestimating genetic divergence timesestimating population splitting times

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10)

Recommendations

• Maximum likelihood estimation of population divergence times and population phylogenies under the infinite sites model
• The exact distribution of divergence times
• Using rare mutations to estimate population divergence times: A maximum likelihood approach
• Logarithmic bounds on the posterior divergence time of two sequences
• Inference from gene trees in a subdivided population

Cites work

• Comparison of phylogenetic trees
• Exact sampling distributions from the infinite neutral alleles model
• Lines of descent and the coalescent
• Lines of descent in the diffusion approximation of neutral Wright-Fisher models
• Partition structures, Polya urns, the Ewens sampling formula, and the ages of alleles
• Pólya-like urns and the Ewens' sampling formula
• The genetic divergence of three populations
• The genetic divergence of two populations
• The transient behaviour of the Moran model in population genetics

Cited in

(8)

• Logarithmic bounds on the posterior divergence time of two sequences
• Bayesian estimation of the phylogeography of African gorillas with genome-differentiated population trees
• Genealogy of neutral genes in two partially isolated populations
• A Bayesian method for estimating evolutionary history
• Estimating primate divergence times by using conditioned birth-and-death processes
• Understanding the tripartite approach to Bayesian divergence time estimation
• Divergence time and population size in the lineage leading to modern humans
• The exact distribution of divergence times

This page was built for publication: Estimating divergence times

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q1109710)