Inference from gene trees in a subdivided population

DOI10.1006/tpbi.1999.1447zbMath0984.92020WikidataQ33900324 ScholiaQ33900324MaRDI QIDQ5939160

Robert C. Griffiths, Melanie Bahlo

Publication date: 12 May 2002

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1006/tpbi.1999.1447

zbMATH Keywords

population genetics; ancestral inference; coalescent process; gene trees; samples of DNA; subdivided populations; time to the most recent common ancestor

Mathematics Subject Classification ID

92D15: Problems related to evolution

92-08: Computational methods for problems pertaining to biology

Related Items

Importance sampling on coalescent histories. I, Importance sampling on coalescent histories. II: Subdivided population models, Inference from gene trees in a subdivided population, Times on trees, and the age of an allele, Slicing and dicing the genome: A statistical physics approach to population genetics, Experiments with the site frequency spectrum, Gene mapping via the ancestral recombination graph, The coalescence time of sampled genes in the structured coalescent model, Corridors for migration between large subdivided populations, and the structured coalescent, The coalescent in an island model of population subdivision with variation among demes., The ages of mutations in gene trees, Exact moment calculations for genetic models with migration, mutation, and drift, Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach, Structured coalescent with nonconservative migration, Importance sampling and the two-locus model with subdivided population structure

Uses Software

• Genetree

Cites Work

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