Genealogical-tree probabilities in the infinitely-many-site model

DOI10.1007/BF00276949MaRDI QIDQ753709zbMATH OpenOpenAlexWikidataFDO

Authors Robert Griffiths

Publication date 1989

Published in Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/bf00276949

zbMATH Keywords

genealogical treeinfinitely-many-site modelpopulation genetics

Mathematics Subject Classification ID

Trees (05C05) Applications of graph theory (05C90) Branching processes (Galton-Watson, birth-and-death, etc.) (60J80) Applications of branching processes (60J85) Software, source code, etc. for problems pertaining to biology (92-04) Genetics and epigenetics (92D10)

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Cites work

• Allelic frequencies given the sample's common ancestral type
• Counting genealogical trees
• scientific article; zbMATH DE number 3748431 (Why is no real title available?)
• Line-of-descent and genealogical processes, and their applications in population genetics models
• On the number of segregating sites in genetical models without recombination
• Pólya-like urns and the Ewens' sampling formula
• The ages of alleles and a coalescent
• The birth process with immigration, and the genealogical structure of large populations
• The coalescent
• The infinitely-many-neutral-alleles diffusion model by ages
• The infinitely-many-sites model as a measure-valued diffusion
• The population genealogy of the infinitely-many neutral alleles model
• The sampling theory of neutral alleles and an urn model in population genetics
• The sampling theory of selectively neutral alleles

Cited in

(16)

• Counting genealogical trees
• Probability of a segregating pattern in a sample of DNA sequences
• Maximum likelihood estimation of population divergence times and population phylogenies under the infinite sites model
• Coalescing into the 21st century: An overview and prospects of coalescent theory
• Ancestral processes with selection
• The asymptotic behavior of an urn model arising
• The ages of mutations in gene trees
• Unrooted genealogical tree probabilities in the infinitely-many-sites model
• The transition distribution of a sample from a Wright-Fisher diffusion with general small mutation rates
• Path integral formulation and Feynman rules for phylogenetic branching models
• Importance sampling on coalescent histories. I
• Inference from gene trees in a subdivided population
• An almost infinite sites model
• Phase-type distributions in mathematical population genetics: an emerging framework
• Ancestral inference from haplotypes and mutations
• Gene mapping via the ancestral recombination graph

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