The transition distribution of a sample from a Wright-Fisher diffusion with general small mutation rates

DOI10.1007/s00285-019-01430-8zbMath1428.92079arXiv1812.05236OpenAlexW2973928616WikidataQ90155678 ScholiaQ90155678MaRDI QIDQ2007701

Conrad J. Burden, Robert C. Griffiths

Publication date: 22 November 2019

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1812.05236

zbMATH Keywords

Wright-Fisher diffusioncoalescent treesmall mutation rates

Mathematics Subject Classification ID

Problems related to evolution (92D15) Genetics and epigenetics (92D10)

Related Items (2)

Maximum likelihood estimators for scaled mutation rates in an equilibrium mutation-drift model ⋮ The stationary and quasi-stationary properties of neutral multi-type branching process diffusions

Uses Software

• PoMo

Cites Work

• Inference of directional selection and mutation parameters assuming equilibrium
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• The infinitely-many-sites model as a measure-valued diffusion
• Lines of descent in the diffusion approximation of neutral Wright-Fisher models
• The coalescent
• The ages of mutations in gene trees
• Stationary distribution of a 2-island 2-allele wright-Fisher diffusion model with slow mutation and migration rates
• The stationary distribution of a sample from the Wright-Fisher diffusion model with general small mutation rates
• An approximate stationary solution for multi-allele neutral diffusion with low mutation rates
• Rate matrix estimation from site frequency data
• An alternative derivation of the stationary distribution of the multivariate neutral Wright-Fisher model for low mutation rates with a view to mutation rate estimation from site frequency data
• The sampling theory of selectively neutral alleles
• Diffusion processes and coalescent trees
• A transition density expansion for a multi-allele diffusion model
• The age of a mutation in a general coalescent tree

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