Unrooted genealogical tree probabilities in the infinitely-many-sites model
DOI10.1016/0025-5564(94)00044-ZzbMATH Open0818.92010OpenAlexW2076515518WikidataQ52342317 ScholiaQ52342317MaRDI QIDQ1804843FDOQ1804843
Authors: Simon Tavaré, Robert Griffiths
Publication date: 17 May 1995
Published in: Mathematical Biosciences (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/0025-5564(94)00044-z
Recommendations
coalescenttree structureancestral labelingapproximants to sampling probabilitiesinfinitely many-sites processmaximum likelihood estimators of the substitution rateMonte Carlo recursionrooted genealogiessamples of DNA sequencessequence variabilityunrooted genealogy
Probabilistic methods, stochastic differential equations (65C99) Genetics and epigenetics (92D10) Problems related to evolution (92D15)
Cites Work
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- On the number of segregating sites in genetical models without recombination
- Efficient algorithms for inferring evolutionary trees
- The infinitely-many-sites model as a measure-valued diffusion
- Counting genealogical trees
- Simulating probability distributions in the coalescent
- Genealogical-tree probabilities in the infinitely-many-site model
- Estimation of the neutral mutation rate in a finite population from DNA sequence data
Cited In (19)
- Inference from gene trees in a subdivided population
- On coalescence analysis using genealogy rooted trees
- Probability of a segregating pattern in a sample of DNA sequences
- Maximum likelihood estimation of population divergence times and population phylogenies under the infinite sites model
- Importance sampling for Lambda-coalescents in the infinitely many sites model
- An analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutations
- Genealogical-tree probabilities in the infinitely-many-site model
- Ages of mutations on a coalescent tree
- The ages of mutations in gene trees
- The infinitely-many-sites model as a measure-valued diffusion
- Analysis of DNA sequence variation within marine species using Beta-coalescents
- Counting genealogical trees
- Importance sampling for lambda-coalescents in the infinitely many sites model
- Coalescing into the 21st century: An overview and prospects of coalescent theory
- Monte Carlo inference methods in population genetics
- An Efficient Coalescent Model for Heterochronously Sampled Molecular Data
- Estimation of parameters in large offspring number models and ratios of coalescence times
- Motif Yggdrasil: Sampling from a Tree Mixture Model
- Alternatives to the Wright-Fisher model: the robustness of mitochondrial Eve dating
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