On the accuracy of ancestral sequence reconstruction for ultrametric trees with parsimony

DOI10.1007/s11538-018-0407-5zbMath1390.92093arXiv1706.06085OpenAlexW2719896867WikidataQ87866725 ScholiaQ87866725MaRDI QIDQ1636052

Lina Herbst, Mareike Fischer

Publication date: 4 June 2018

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1706.06085

zbMATH Keywords

maximum parsimonyreconstruction accuracyancestral sequence reconstructionsymmetric four-state model

Mathematics Subject Classification ID

Trees (05C05) Problems related to evolution (92D15)

Related Items (3)

Quantifying the accuracy of ancestral state prediction in a phylogenetic tree under maximum parsimony ⋮ Sufficient condition for root reconstruction by parsimony on binary trees with general weights ⋮ Ancestral state reconstruction with large numbers of sequences and edge-length estimation

Cites Work

• Analyzing the fitch method for reconstructing ancestral states on ultrametric phylogenetic trees
• Links between maximum likelihood and maximum parsimony under a simple model of site substitution
• Maximum parsimony on subsets of taxa

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