A likelihood-free filtering method via approximate Bayesian computation in evaluating biological simulation models

DOI10.1016/j.csda.2015.08.003zbMath1468.62075OpenAlexW1208113704MaRDI QIDQ1660138

Takanori Hasegawa, Tatsuya Akutsu, Satoru Miyano, Teppei Shimamura, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Tomoya Mori

Publication date: 15 August 2018

Published in: Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.csda.2015.08.003

zbMATH Keywords

approximate Bayesian computationgene expressionnonlinear state space modelbiological simulation

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Inference from stochastic processes and prediction (62M20) Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15)

Uses Software

• KEGG

Cites Work

• An adaptive sequential Monte Carlo method for approximate Bayesian computation
• Filtering via approximate Bayesian computation
• Estimation of Parameters for Macroparasite Population Evolution Using Approximate Bayesian Computation
• Sequential Monte Carlo Samplers
• Entrainment versus chaos in a model for a circadian oscillator driven by light-dark cycles
• Bayesian estimation of state-space models using the Metropolis-Hastings algorithm within Gibbs sampling.