A distribution-matching method for parameter estimation and model selection in computational biology
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Publication:4909330
Filtering in stochastic control theory (93E11) Systems biology, networks (92C42) Nonlinear systems in control theory (93C10) Control/observation systems governed by ordinary differential equations (93C15) Estimation and detection in stochastic control theory (93E10) Identification in stochastic control theory (93E12)
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Cites work
- Asymptotic Minimax Character of the Sample Distribution Function and of the Classical Multinomial Estimator
- Model selection and mixed-effects modeling of HIV infection dynamics
- Optimization by simulated annealing
- Sequential Monte Carlo without likelihoods
- The tight constant in the Dvoretzky-Kiefer-Wolfowitz inequality
Cited in
(19)- Tensor based approach to the numerical treatment of the parameter estimation problems in mathematical immunology
- Change detection in the dynamics of an intracellular protein synthesis model using nonlinear Kalman filtering
- Weak SINDy: Galerkin-based data-driven model selection
- Parameter selection and verification techniques based on global sensitivity analysis illustrated for an HIV model
- Application of the Global Optimization Methods for Solving the Parameter Estimation Problem in Mathematical Immunology
- A review of stochastic and delay simulation approaches in both time and space in computational cell biology
- A global parallel model based design of experiments method to minimize model output uncer\-tainty
- A homotopy method for parameter estimation of nonlinear differential equations with multiple optima
- Approximate Bayesian computational methods for the inference of unknown parameters
- Global minimization and parameter estimation in computational biology.
- A likelihood-free filtering method via approximate Bayesian computation in evaluating biological simulation models
- Revisiting a synthetic intracellular regulatory network that exhibits oscillations
- Global dynamics and parameter identifiability in a predator-prey interaction model
- A new five-parameter Birnbaum-Saunders distribution for modeling \textit{bicoid} gene expression data
- Convergence of Griddy Gibbs sampling and other perturbed Markov chains
- Modular parameter identification of biomolecular networks
- Modeling, simulating, and parameter Fitting of biochemical kinetic experiments
- Block-tridiagonal state-space realization of chemical master equations: a tool to compute explicit solutions
- Reaction network models as a tool to study gene regulation and cell signaling in development and diseases
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