SDPhound, a mutual information-based method to investigate specificity-determining positions

DOI10.3390/A2020764zbMATHOpenAlexWikidataMaRDI QIDQ1662480FDO

Authors Sara Bonella, Walter Rocchia, Pietro Amat, Riccardo Nifosí, Valentina Tozzini

Publication date 20 August 2018

Published in Algorithms (Search for Journal in Brave)

Full work available at URL https://doi.org/10.3390/a2020764

zbMATH Keywords

mutual informationintrinsically fluorescent proteinsspecificity determining positions

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

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Cites work

• On triple mutual information
• Permutation tests. A practical guide to resampling methods for testing hypotheses

Cited in

(1)

• A non-parametric method for detecting specificity determining sites in protein sequence alignments

Describes a project that uses

Uses Software

• VMD

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