Long-time simulations with complex code using multiple nodes of Intel Xeon Phi knights landing

DOI10.1016/J.CAM.2017.12.050MaRDI QIDQ1747288zbMATH OpenOpenAlexFDO

Authors Jonathan S. Graf, Matthias K. Gobbert, Samuel Khuvis

Publication date 4 May 2018

Published in Journal of Computational and Applied Mathematics (Search for Journal in Brave)

Full work available at URL http://hdl.handle.net/11603/11300

zbMATH Keywords

calcium induced calcium releaseIntel Xeon Phiknights landingMPIopenMPparabolic partial differential equations

Mathematics Subject Classification ID

Nonlinear initial, boundary and initial-boundary value problems for nonlinear parabolic equations (35K61) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Finite volume methods for initial value and initial-boundary value problems involving PDEs (65M08) Parallel numerical computation (65Y05) Physiological flow (92C35)

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Cites work

• A memory-efficient finite element method for systems of reaction--diffusion equations with non-smooth forcing
• A memory-efficient finite volume method for advection-diffusion-reaction systems with nonsmooth sources
• Feedback-control induced pattern formation in cardiac myocytes: a mathematical modeling study
• Long-Time Simulations on High Resolution Meshes to Model Calcium Waves in a Heart Cell

Cited in

(1)

• Code modernization strategies to 3-D stencil-based applications on intel Xeon Phi: KNC and KNL

Describes a project that uses

Uses Software

• CUDA

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