Disguised toric dynamical systems

DOI10.1016/J.JPAA.2022.107035zbMATH Open1485.14106arXiv2006.01289OpenAlexW4207051822MaRDI QIDQ2134666FDOQ2134666

Authors: Laura Brustenga i Moncusí, Miruna-Ştefana Sorea, Gheorghe Craciun 

Publication date: 3 May 2022

Published in: Journal of Pure and Applied Algebra (Search for Journal in Brave)

Abstract: We study families of polynomial dynamical systems inspired by biochemical reaction networks. We focus on complex balanced mass-action systems, which have also been called toric. They are known or conjectured to enjoy very strong dynamical properties, such as existence and uniqueness of positive steady states, local and global stability, persistence, and permanence. We consider the class of disguised toric dynamical systems, which contains toric dynamical systems, and to which all dynamical properties mentioned above extend naturally. By means of (real) algebraic geometry we show that some reaction networks have an empty toric locus or a toric locus of Lebesgue measure zero in parameter space, while their disguised toric locus is of positive measure. We also propose some algorithms one can use to detect the disguised toric locus.

Full work available at URL: https://arxiv.org/abs/2006.01289

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zbMATH Keywords

reaction networkEuclidean embedded graphtoric system

Mathematics Subject Classification ID

Real algebraic sets (14P05) Global stability of solutions to ordinary differential equations (34D23) Semialgebraic sets and related spaces (14P10) Low-dimensional dynamical systems (37E99) Ordinary differential equations and connections with real algebraic geometry (fewnomials, desingularization, zeros of abelian integrals, etc.) (34C08) Computational real algebraic geometry (14Q30)

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Cited In (8)

• The Disguised Toric Locus and Affine Equivalence of Reaction Networks
• Complexity of model testing for dynamical systems with toric steady states
• Families of toric chemical reaction networks
• Toric dynamical systems
• On the connectivity of the disguised toric locus of a reaction network
• Quasi-toric differential inclusions
• A lower bound on the dimension of the \(\mathbb{R}\)-disguised toric locus of a reaction network
• The structure of the toric locus of a reaction network

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