A qualitative analysis of ubiquitous regulatory motifs in \textit{Saccharomyces cerevisiae} genetic networks

DOI10.1016/J.CNSNS.2018.09.001MaRDI QIDQ2206180zbMATH OpenOpenAlexFDO

Authors Erika T. Camacho, Anca Rǎdulescu, Stephen Wirkus, Pamela A. Marshall

Publication date 21 October 2020

Published in Communications in Nonlinear Science and Numerical Simulation (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.cnsns.2018.09.001

zbMATH Keywords

bifurcationgene networkrecurrent neural network

Mathematics Subject Classification ID

Artificial neural networks and deep learning (68T07) Systems biology, networks (92C42) Genetics and epigenetics (92D10)

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Cites work

• scientific article; zbMATH DE number 3619680 (Why is no real title available?)
• scientific article; zbMATH DE number 2002582 (Why is no real title available?)
• Inverse problems in systems biology
• MATCONT
• Recent developments in parameter estimation and structure identification of biochemical and genomic systems

Cited in

(4)

• Statistically significant strings are related to regulatory elements in the promoter regions of Saccharomyces cerevisiae
• Comparative study of the transcriptional regulatory networks of \textit{E. coli} and yeast: structural characteristics leading to marginal dynamic stability
• Incoherent modulation of bi-stable dynamics orchestrates the Mushroom and Isola bifurcations
• Parameter estimation for gene regulatory networks from microarray data: cold shock response in \textit{Saccharomyces cerevisiae}

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Uses Software

• CL_MATCONT
• MATCONT

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