Behavior of different numerical schemes for random genetic drift

DOI10.1007/S10543-019-00749-4zbMATH Open1420.65091OpenAlexW2931426355MaRDI QIDQ2273201FDOQ2273201

Yanyan Li

Publication date: 18 September 2019

Published in: BIT (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10543-019-00749-4

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zbMATH Keywords

finite difference methodfinite element methodfinite volume methodrandom genetic driftdegenerate equationconservations of probability and expectationnumerical viscosity and numerical anti-diffusion

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Degenerate parabolic equations (35K65) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06) Finite volume methods for initial value and initial-boundary value problems involving PDEs (65M08)

Cites Work

• Finite Volume Methods for Hyperbolic Problems
• Title not available (Why is that?)
• Galerkin Finite Element Methods for Parabolic Problems
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• Fixation at a locus with multiple alleles: structure and solution of the Wright Fisher model
• Singular solutions of the diffusion equation of population genetics
• Diffusion models in population genetics
• The Differential Equation of the Distribution of Gene Frequencies
• A general solution of the Wright-Fisher model of random genetic drift
• Generalized population models and the nature of genetic drift
• Numerical complete solution for random genetic drift by energetic variational approach
• Exact Markov chain and approximate diffusion solution for haploid genetic drift with one-way mutation

Cited In (3)

• A non-local Fokker-Planck equation with application to probabilistic evaluation of sediment replenishment projects
• An Optimal Mass Transport Method for Random Genetic Drift
• Numerical Method for Multi-Alleles Genetic Drift Problem

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