The probability distribution of the reconstructed phylogenetic tree with occurrence data

DOI10.1016/j.jtbi.2019.110115zbMath1430.92054OpenAlexW2995358823WikidataQ92185047 ScholiaQ92185047MaRDI QIDQ2294458

Timothy S. Vaughan, Ankit Gupta, Mustafa H. Khammash, Marc Manceau, Tanja Stadler

Publication date: 11 February 2020

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: http://hdl.handle.net/20.500.11850/388597

zbMATH Keywords

epidemiologybirth-death processphylogeneticsmacroevolutionphylodynamics

Mathematics Subject Classification ID

Epidemiology (92D30) Problems related to evolution (92D15) Applications of branching processes (60J85)

Related Items (2)

Statistical challenges in tracking the evolution of SARS-CoV-2 ⋮ The probability distribution of the ancestral population size conditioned on the reconstructed phylogenetic tree with occurrence data

Cites Work

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• Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
• Stochastic models and descriptive statistics for phylogenetic trees, from Yule to today.
• The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes
• Sampling-through-time in birth-death trees
• Formulae for high derivatives of composite functions
• On the Generalized "Birth-and-Death" Process

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