Predicting methylation from sequence and gene expression using deep learning with attention

DOI10.1007/978-3-030-18174-1_13MaRDI QIDQ2315519zbMATH OpenOpenAlexFDO

Authors Alona Levy-Jurgenson, Xavier Tekpli, Vessela N. Kristensen, Zohar Yakhini

Publication date 25 July 2019

Full work available at URL https://doi.org/10.1101/491357

zbMATH Keywords

attentiondeep learninggenomicsmethylation

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Biochemistry, molecular biology (92C40)

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Cited in

(4)

• Methylation
• Context-aware dynamic neural computational models for accurate Poly(A) signal prediction
• Intelligent phenotype-detection and gene expression profile generation with generative adversarial networks
• Self-supervised learning for DNA sequences with circular dilated convolutional networks

Describes a project that uses

Uses Software

• Adam
• DRIMust
• GitHub

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