Predicting methylation from sequence and gene expression using deep learning with attention

DOI10.1007/978-3-030-18174-1_13zbMATH Open1416.92061OpenAlexW2904411752MaRDI QIDQ2315519FDOQ2315519

Authors: Alona Levy-Jurgenson, Xavier Tekpli, Vessela N. Kristensen, Zohar Yakhini 

Publication date: 25 July 2019

Full work available at URL: https://doi.org/10.1101/491357

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zbMATH Keywords

deep learningattentiongenomicsmethylation

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

Cited In (4)

• Intelligent phenotype-detection and gene expression profile generation with generative adversarial networks
• Self-supervised learning for DNA sequences with circular dilated convolutional networks
• Context-aware dynamic neural computational models for accurate Poly(A) signal prediction
• Methylation

Uses Software

• Adam
• DRIMust
• GitHub

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