Irreducibility in RNA structures

DOI10.1007/s11538-009-9451-5zbMath1185.92042arXiv0902.3784OpenAlexW2155855754WikidataQ51778097 ScholiaQ51778097MaRDI QIDQ2380838

Christian M. Reidys, Emma Yu Jin

Publication date: 12 April 2010

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/0902.3784

zbMATH Keywords

returnsingularity analysispseudoknotirreducible substructure\(k\)-noncrossing \(\sigma \)-canonical diagram\(k\)-noncrossing \(\sigma \)-canonical RNA structurelargest irreducible substructure

Mathematics Subject Classification ID

Applications of graph theory (05C90) Combinatorial probability (60C05) Biochemistry, molecular biology (92C40)

Related Items (2)

The rainbow spectrum of RNA secondary structures ⋮ On integrating multi-experiment microarray data

Cites Work

• Combinatorial design of pseudoknot RNA
• On the decomposition of \(k\)-noncrossing RNA structures
• Spaces of RNA secondary structures
• Linear trees and RNA secondary structure
• Combinatorics of RNA structures with pseudoknots
• Computation of Generating Functions for Biological Molecules
• Combinatorics of RNA Hairpins and Cloverleaves
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