A continuous energy-based immersed boundary method for elastic shells
From MaRDI portal
Publication:2425273
DOI10.1016/J.JCP.2018.05.045zbMATH Open1415.76778arXiv1711.07612OpenAlexW2803755816WikidataQ129761553 ScholiaQ129761553MaRDI QIDQ2425273FDOQ2425273
Andrew T. Kassen, Ondrej Maxian, Wanda Strychalski
Publication date: 26 June 2019
Published in: Journal of Computational Physics (Search for Journal in Brave)
Abstract: The immersed boundary method is a mathematical formulation and numerical method for solving fluid-structure interaction problems. For many biological problems, such as models that include the cell membrane, the immersed structure is a two-dimensional infinitely thin elastic shell immersed in an incompressible viscous fluid. When the shell is modeled as a hyperelastic material, forces can be computed by taking the variational derivative of an energy density functional. A new method for computing a continuous force function on the entire surface of the shell is presented here. The new method is compared to a previous formulation where the surface and energy functional are discretized before forces are computed. For the case of Stokes flow, a method for computing quadrature weights is provided to ensure the integral of the elastic spread force density remains zero throughout a dynamic simulation. Tests on the method are conducted and show that it yields more accurate force computations than previous formulations as well as more accurate geometric information such as mean curvature. The method is then applied to a model of a red blood cell in capillary flow and a 3D model of cellular blebbing.
Full work available at URL: https://arxiv.org/abs/1711.07612
Fluid-solid interactions (including aero- and hydro-elasticity, porosity, etc.) (74F10) Stokes and related (Oseen, etc.) flows (76D07) Physiological flows (76Z05)
Cites Work
- Title not available (Why is that?)
- Title not available (Why is that?)
- The Immersed Interface Method
- Spectral methods for incompressible viscous flow
- On the hyperelastic formulation of the immersed boundary method
- A computational model of aquatic animal locomotion
- A computational model of the cochlea using the immersed boundary method
- Flow patterns around heart valves: A numerical method
- The immersed boundary method
- Boundary Integral and Singularity Methods for Linearized Viscous Flow
- Extremal systems of points and numerical integration on the sphere
- An immersed boundary method with formal second-order accuracy and reduced numerical viscosity
- Axisymmetric motion of a file of red blood cells through capillaries
- How good can polynomial interpolation on the sphere be?
- A 3D immersed interface method for fluid-solid interaction
- On the order of accuracy of the immersed boundary method: higher order convergence rates for sufficiently smooth problems
- Immersed boundary method for variable viscosity and variable density problems using fast constant-coefficient linear solvers. I: Numerical method and results
- Tether Force Constraints in Stokes Flow by the Immersed Boundary Method on a Periodic Domain
- An immersed boundary energy-based method for incompressible viscoelasticity
- Curvatures of Smooth and Discrete Surfaces
- A fast algorithm for simulating vesicle flows in three dimensions
- Interfacial dynamics for Stokes flow.
- A spectral boundary integral method for flowing blood cells
- A study of different modeling choices for simulating platelets within the immersed boundary method
- Motion and deformation of elastic capsules and vesicles in flow
- A non-monotonic method for large-scale non-negative least squares
- On the computation of nonnegative quadrature weights on the sphere
- A poroelastic immersed boundary method with applications to cell biology
- Second variation of the Helfrich–Canham Hamiltonian and reparametrization invariance
- Kernel based quadrature on spheres and other homogeneous spaces
- A computational model of bleb formation
- Simulation of Osmotic Swelling by the Stochastic Immersed Boundary Method
- Global contraction or local growth, bleb shape depends on more than just cell structure
- Spherical harmonic analysis, aliasing, and filtering
- Elastic bending energy: a variational approach
- Augmenting the immersed boundary method with Radial Basis Functions (RBFs) for the modeling of platelets in hemodynamic flows
- Eulerian-Lagrangian treatment of nondilute two-phase gels
Cited In (2)
Uses Software
This page was built for publication: A continuous energy-based immersed boundary method for elastic shells
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2425273)
