A continuous energy-based immersed boundary method for elastic shells
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Publication:2425273
Abstract: The immersed boundary method is a mathematical formulation and numerical method for solving fluid-structure interaction problems. For many biological problems, such as models that include the cell membrane, the immersed structure is a two-dimensional infinitely thin elastic shell immersed in an incompressible viscous fluid. When the shell is modeled as a hyperelastic material, forces can be computed by taking the variational derivative of an energy density functional. A new method for computing a continuous force function on the entire surface of the shell is presented here. The new method is compared to a previous formulation where the surface and energy functional are discretized before forces are computed. For the case of Stokes flow, a method for computing quadrature weights is provided to ensure the integral of the elastic spread force density remains zero throughout a dynamic simulation. Tests on the method are conducted and show that it yields more accurate force computations than previous formulations as well as more accurate geometric information such as mean curvature. The method is then applied to a model of a red blood cell in capillary flow and a 3D model of cellular blebbing.
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Cites work
- scientific article; zbMATH DE number 1912155 (Why is no real title available?)
- scientific article; zbMATH DE number 3245332 (Why is no real title available?)
- A 3D immersed interface method for fluid-solid interaction
- A computational model of aquatic animal locomotion
- A computational model of bleb formation
- A computational model of the cochlea using the immersed boundary method
- A fast algorithm for simulating vesicle flows in three dimensions
- A non-monotonic method for large-scale non-negative least squares
- A poroelastic immersed boundary method with applications to cell biology
- A spectral boundary integral method for flowing blood cells
- A study of different modeling choices for simulating platelets within the immersed boundary method
- An immersed boundary energy-based method for incompressible viscoelasticity
- An immersed boundary method with formal second-order accuracy and reduced numerical viscosity
- Augmenting the immersed boundary method with radial basis functions (RBFs) for the modeling of platelets in hemodynamic flows
- Axisymmetric motion of a file of red blood cells through capillaries
- Boundary Integral and Singularity Methods for Linearized Viscous Flow
- Curvatures of Smooth and Discrete Surfaces
- Elastic bending energy: a variational approach
- Eulerian-Lagrangian treatment of nondilute two-phase gels
- Extremal systems of points and numerical integration on the sphere
- Flow patterns around heart valves: A numerical method
- Global contraction or local growth, bleb shape depends on more than just cell structure
- How good can polynomial interpolation on the sphere be?
- Immersed boundary method for variable viscosity and variable density problems using fast constant-coefficient linear solvers. I: Numerical method and results
- Interfacial dynamics for Stokes flow.
- Kernel based quadrature on spheres and other homogeneous spaces
- Motion and deformation of elastic capsules and vesicles in flow
- On the computation of nonnegative quadrature weights on the sphere
- On the hyperelastic formulation of the immersed boundary method
- On the order of accuracy of the immersed boundary method: higher order convergence rates for sufficiently smooth problems
- Second variation of the Helfrich–Canham Hamiltonian and reparametrization invariance
- Simulation of osmotic swelling by the stochastic immersed boundary method
- Spectral methods for incompressible viscous flow
- Spherical harmonic analysis, aliasing, and filtering
- Tether force constraints in Stokes flow by the immersed boundary method on a periodic domain
- The Immersed Interface Method
- The immersed boundary method
Cited in
(9)- An immersed boundary method for a contractile elastic ring in a three-dimensional Newtonian fluid
- Simulating an elastic ring with bend and twist by an adaptive generalized immersed boundary method
- Numerical analysis of the immersed boundary method for cell-based simulation
- An energy stable immersed boundary method for deformable membrane problem with non-uniform density and viscosity
- Immersed boundary simulations of cell-cell interactions in whole blood
- An immersed boundary energy-based method for incompressible viscoelasticity
- Stabilization approaches for the hyperelastic immersed boundary method for problems of large-deformation incompressible elasticity
- On the hyperelastic formulation of the immersed boundary method
- A poroelastic immersed boundary method with applications to cell biology
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