A multidimensional multispecies continuum model for heterogeneous biofilm development
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Publication:2426284
DOI10.1007/s11538-006-9168-7zbMath1138.92371OpenAlexW2135541650WikidataQ51925530 ScholiaQ51925530MaRDI QIDQ2426284
Publication date: 22 April 2008
Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/s11538-006-9168-7
Probabilistic models, generic numerical methods in probability and statistics (65C20) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Ecology (92D40) Numerical methods for partial differential equations, boundary value problems (65N99)
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Uses Software
Cites Work
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- Effect of heterogeneous structure in mechanically unstressed biofilms on overall growth
- A simple level set method for solving Stefan problems
- A second-order-accurate symmetric discretization of the Poisson equation on irregular domains
- Level set methods and dynamic implicit surfaces
- A boundary condition capturing method for Poisson's equation on irregular domains
- A New Deterministic Spatio-Temporal Continuum Model for Biofilm Development
- Finger Formation in Biofilm Layers
- Total-Variation-Diminishing Time Discretizations
- Weighted ENO Schemes for Hamilton--Jacobi Equations
- The role of the biofilm matrix in structural development
- The tyranny of concepts: CUDIE (cumulated, depreciated, investment effort) is not capital
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