3-D numerical simulations of biofilm flows.

DOI10.4208/EAJAM.060111.130411AMaRDI QIDQ5406894zbMATH OpenOpenAlexFDO

Authors Chen Chen, Mingming Ren, Ashok Srinivansan, Qi Wang

Publication date 4 April 2014

Published in East Asian Journal on Applied Mathematics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.4208/eajam.060111.130411a

zbMATH Keywords

biofilmCahn-Hilliard equationfinite difference methodmultiphase flowphase field

Mathematics Subject Classification ID

Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06) Non-Newtonian fluids (76A05) Navier-Stokes equations for incompressible viscous fluids (76D05) Three or more component flows (76T30) Physiological flows (76Z05) Biophysics (92C05)

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Cites work

• A multidimensional multispecies continuum model for heterogeneous biofilm development
• Channel Formation in Gels
• Effect of heterogeneous structure in mechanically unstressed biofilms on overall growth
• Finger formation in biofilm layers
• Gauge-Uzawa methods for incompressible flows with variable density
• Phase Field Models for Biofilms. I. Theory and One-Dimensional Simulations
• The role of the biofilm matrix in structural development

Cited in

(25)

• Simulation of single-species bacterial-biofilm growth using the Glazier-Graner-Ho\-ge\-weg model and the CompuCell3D modeling environment
• Modeling of biocide action against biofilm
• Exposure of biofilms to slow flow fields: the convective contribution to growth and disinfection
• Numerical simulation of biofilm formation in a microchannel
• Hybrid model of bacterial biofilm growth
• Variable viscosity and density biofilm simulations using an immersed boundary method, part II: Experimental validation and the heterogeneous rheology-IBM
• Three-dimensional numerical simulations of biofilm dynamics with quorum sensing in a flow cell
• A simulation study of the effect of meso-scopic sinusoidal surface roughness on biofilm growth
• A multicomponent model for biofilm-drug interaction
• Material modeling of biofilm mechanical properties
• Immersed boundary simulations of fluid shear-induced deformation of a cantilever beam
• 3-D spatio-temporal structures of biofilms in a water channel
• 3-D patterns in bacterial biofilms
• A novel model for biofilm growth and its resolution by using the hybrid immersed interface-level set method
• Modeling antimicrobial tolerance and treatment of heterogeneous biofilms
• A combined extended finite element and level set method for biofilm growth
• Kinetic theories for biofilms
• Fragmentation of biofilm-seeded bacterial aggregates in shear flow
• The role of the biofilm matrix in structural development
• A 2D channel-clogging biofilm model
• Immersed boundary approach to biofilm spread on surfaces
• Phase-field models for biofilms. II: 2-D numerical simulations of biofilm-flow interaction
• Mechanical model for biofilm growth phase
• Immersed Boundary Models of Biofilm Spread
• Two-fluid model of biofilm disinfection

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