A new molecular evolution model for limited insertion independent of substitution

DOI10.1016/J.MBS.2013.06.001zbMATH Open1308.92076OpenAlexW2122356734WikidataQ37846385 ScholiaQ37846385MaRDI QIDQ2437004

Christian J. Michel, Sophie Lèbre

Publication date: 27 February 2014

Published in: Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.mbs.2013.06.001

zbMATH Keywords

substitutionsequence lengthevolution modelsGC contentlimited insertionsequence content

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Problems related to evolution (92D15)

Cites Work

• Computation of direct and inverse mutations with the SEGM web server (stochastic evolution of genetic motifs): an application to splice sites of human genome introns
• Estimation of evolutionary distances between homologous nucleotide sequences.
• An analytical model of gene evolution with 9 mutation parameters: An application to the amino acids coded by the common circular code
• A generalization of substitution evolution models of nucleotides to genetic motifs
• Analytical expression of the purine-pyrimidine codon probability after and before random mutations
• A stochastic evolution model for residue insertion-deletion independent from substitution
• An evolution model for sequence length based on residue insertion-deletion independent of substitution: an application to the \(GC\) content in bacterial genomes

Cited In (3)

• The independent loss model with ordered insertions for the evolution of CRISPR spacers
• A stochastic evolution model for residue insertion-deletion independent from substitution
• Modeling substitution and indel processes for AFLP marker evolution and phylogenetic infer\-ence

Uses Software

• fastDNAml
• SEGM

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