Neighborhood functions and hill-climbing strategies dedicated to the generalized ungapped local multiple alignment

DOI10.1016/J.EJOR.2005.10.076MaRDI QIDQ2464211zbMATH OpenOpenAlexDBLPWikidataFDO

Authors David Romero Hernández, Robin Gras, Ron Appel

Publication date 10 December 2007

Published in European Journal of Operational Research (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.ejor.2005.10.076

zbMATH Keywords

motif discovery

Mathematics Subject Classification ID

Combinatorial optimization (90C27) Applications of mathematical programming (90C90) Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

Recommendations

• MoDEL: an efficient strategy for ungapped local multiple alignment
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• scientific article; zbMATH DE number 1615272

Cites work

• MoDEL: an efficient strategy for ungapped local multiple alignment

Cited in

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• MoDEL: an efficient strategy for ungapped local multiple alignment

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Uses Software

• Pfam
• BioProspector
• Nomad
• PROSITE

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