Exact distribution of the local score for Markovian sequences

DOI10.1007/s10463-006-0064-6zbMath1133.62310OpenAlexW2083780119MaRDI QIDQ2477001

Claudie Hassenforder, Sabine Mercier

Publication date: 12 March 2008

Published in: Annals of the Institute of Statistical Mathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10463-006-0064-6

zbMATH Keywords

Markov chainSequence analysisLocal score

Mathematics Subject Classification ID

Exact distribution theory in statistics (62E15) Markov chains (discrete-time Markov processes on discrete state spaces) (60J10)

Related Items

Duality between the local score of one sequence and constrained hidden Markov model ⋮ Improvements on the distribution of maximal segmental scores in a Markovian sequence ⋮ Probability density function of the local score position

Cites Work

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• A phase transition for the score in matching random sequences allowing deletions
• Exact distribution for the local score of a Markov chain
• Back to the local score in the logarithmic case: A direct and simple proof
• Asymptotic behavior of the local score of independent and identically distributed random sequences.
• Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes.
• Limit distributions of maximal segmental score among Markov-dependent partial sums
• Biological Sequence Analysis