New algorithms for Luria-Delbrück fluctuation analysis

DOI10.1016/J.MBS.2005.03.011MaRDI QIDQ2567077zbMATH OpenOpenAlexWikidataFDO

Authors Qi Zheng

Publication date 29 September 2005

Published in Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.mbs.2005.03.011

zbMATH Keywords

mutation rateNewton-Raphson algorithmobserved Fisher informationprofile likelihood based confidence intervalscore function

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15)

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Cites work

• ``Student and small-sample theory.
• Analysis of the Luria–Delbrück distribution using discrete convolution powers
• scientific article; zbMATH DE number 777587 (Why is no real title available?)
• scientific article; zbMATH DE number 877838 (Why is no real title available?)
• Progress of a half century in the study of the Luria-Delbrück distribution
• Statistical and algorithmic methods for fluctuation analysis with SALVADOR as an implementation

Cited in

(14)

• A note on plating efficiency in fluctuation experiments
• On Bartlett's formulation of the Luria-Delbrück mutation model
• Statistical and algorithmic methods for fluctuation analysis with SALVADOR as an implementation
• Fluctuation analysis on mutation models with birth-date dependence
• Accumulation of neutral mutations in growing cell colonies with competition
• Mean field mutation dynamics and the continuous Luria-Delbrück distribution
• Statistics for the Luria-Delbrück distribution
• Estimation of rates of non-neutral mutations when bacteria are exposed to subinhibitory levels of antibiotics
• New approaches to mutation rate fold change in Luria-Delbrück fluctuation experiments
• Fast maximum likelihood estimation of mutation rates using a birth-death process
• On Haldane's formulation of Luria and Delbrück's mutation model
• A new discrete distribution induced by the Luria-Delbrück mutation model
• Estimating mutation rates in a Markov branching process using approximate Bayesian computation
• A note on a universal random variate generator for integer-valued random variables

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