Parameter estimation for metabolic networks with two stage Bregman regularization homotopy inversion algorithm

DOI10.1016/j.jtbi.2013.09.020zbMath1411.92124OpenAlexW2009297967WikidataQ51161069 ScholiaQ51161069MaRDI QIDQ2632487

Yanyan Li

Publication date: 14 May 2019

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2013.09.020

zbMATH Keywords

ordinary differential equationlarge scalestrong nonlinear

Mathematics Subject Classification ID

Physiology (general) (92C30) Systems biology, networks (92C42)

Uses Software

• SUNDIALS

Cites Work

• Unnamed Item
• SUNDIALS
• Convergence analysis of the homotopy perturbation method for solving nonlinear ill-posed operator equations
• A study on the convergence of homotopy analysis method
• Notes on the homotopy analysis method: some definitions and theorems
• Computation and analysis of time-dependent sensitivities in generalized mass action systems
• The homotopy analysis method to solve the Burgers-Huxley equation
• Scatter search for chemical and bio-process optimization
• The application of homotopy analysis method to nonlinear equations arising in heat transfer
• A regularized solution with weighted bregman distances for the inverse problem of photoacoustic spectroscopy
• Estimating parameters for generalized mass action models using constraint propagation
• Parameter reconstruction for biochemical networks using interval analysis
• An Iterative Regularization Method for Total Variation-Based Image Restoration

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