Markov mean properties for cell death-related protein classification

DOI10.1016/J.JTBI.2014.01.033MaRDI QIDQ2632745zbMATH OpenOpenAlexWikidataFDO

Authors Carlos Fernandez-Lozano, Marcos Gestal, Alejandro Pazos, Cristian Robert Munteanu, Humberto González Díaz, Julian Dorado

Publication date 15 May 2019

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL http://hdl.handle.net/2183/17985

zbMATH Keywords

machine learningMarkov chainscell deathQSARprotein classification

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

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Cites work

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• Analyzing Microarray Gene Expression Data
• Enzymes/non-enzymes classification model complexity based on composition, sequence, 3D and topological indices
• LIBLINEAR: a library for large linear classification
• Nearest neighbor pattern classification
• Pattern recognition and machine learning.
• Random forests
• Wrappers for feature subset selection

Cited in

(2)

• Fer-COCL: A Novel Method Based on Multiple Deep Learning Algorithms for Identifying Fertility-Related Proteins
• Classification of signaling proteins based on molecular star graph descriptors using machine learning models

Describes a project that uses

Uses Software

• LIBLINEAR
• WEKA
• PISCES
• MIND-BEST
• AmiGO
• MARCH-INSIDE
• SMOTE
• PRMLT

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