Modeling sequence evolution in HIV-1 infection with recombination

DOI10.1016/J.JTBI.2013.03.026MaRDI QIDQ2635002zbMATH OpenOpenAlexWikidataFDO

Authors Elena Edi Giorgi, Bette T. Korber, Alan S. Perelson, T. Bhattacharya

Publication date 11 February 2016

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc3667750

zbMATH Keywords

HIVpopulation dynamicsviral evolution

Mathematics Subject Classification ID

Medical epidemiology (92C60) Problems related to evolution (92D15)

Recommendations

• Modeling sequence evolution in acute HIV-1 infection
• Mathematical modelling of HIV within-host evolution
• A competition model of HIV with recombination effect
• A mutagenetic tree hidden Markov model for longitudinal clonal HIV sequence data
• The growth of HIV in the presence of multiple infections

Cites work

• scientific article; zbMATH DE number 3954718 (Why is no real title available?)
• scientific article; zbMATH DE number 1160035 (Why is no real title available?)
• scientific article; zbMATH DE number 1391030 (Why is no real title available?)
• Mathematical biology. Vol. 1: An introduction.
• Modeling sequence evolution in acute HIV-1 infection
• Population dynamics with age- and time-dependent birth and death rates

Cited in

(7)

• scientific article; zbMATH DE number 5888322 (Why is no real title available?)
• A competition model of HIV with recombination effect
• Sampling HIV intrahost genealogies based on a model of acute stage CTL response
• Modeling sequence evolution in acute HIV-1 infection
• Contribution of HIV-1 genomes that do not integrate to the basic reproductive ratio of the virus
• INFECTION MODEL BASED ON HAMMING DISTANCE WITH AGE
• Dynamics of HIV-1 coinfection in different susceptible target cell populations during cell-free infection

Describes a project that uses

Uses Software

• BEAST
• R

This page was built for publication: Modeling sequence evolution in HIV-1 infection with recombination

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2635002)