Set-spectrum method in structure comparison and the concept of topological kinship
The problem of quantitative estimation of common and different properties in compared objects is enough complex, especially if a universal approach to the topic is undertaken. This paper treats the design and investigation of expressions for structural properties of objects, mathematical concepts of similarity and dissimilarity which are approached separately, and their mutual influence and resultant estimations by suitable metrics (pseudometrics). Topologies are built on pseudometrics, and their relationship to structures is studied. The theory has been created for applications, and is illustrated by biochemically important examples of labeled sequences. Although the examples given are concerned with biochemical sequence analysis, the essential notions and solutions are given in general mathematical terms. The approach may well be suitable for other branches of science than chemistry.
- A metric for graphs
- General methods of sequence comparison
- scientific article; zbMATH DE number 3581219 (Why is no real title available?)
- scientific article; zbMATH DE number 3314372 (Why is no real title available?)
- Sequence comparison with concave weighting functions
- Significance levels for biological sequence comparison using non-linear similarity functions
- The prediction of a protein and nucleic acid structure: Problems and prospects
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