Pairwise sequence alignment revisited -- genetic algorithms and cosine functions

zbMATH Open1337.68303MaRDI QIDQ2808615FDOQ2808615

Authors: Mohammed Benothman, Gamil A. Azim, Aboubekeur Hamdi-Cherif 

Publication date: 24 May 2016

Recommendations

• The Multiple Sequence Alignment Problem in Biology
• scientific article; zbMATH DE number 2040771
• scientific article; zbMATH DE number 2013493
• A genetic algorithm on multiple sequences alignment problems in biology
• Multiple DNA and protein sequence alignment based on segment-to-segment comparison.

zbMATH Keywords

heuristicscombinatorial optimizationdynamic programmingDNAcomputational molecular biologysequence alignmentstructural biologyparsing biological sequences

Mathematics Subject Classification ID

Problem solving in the context of artificial intelligence (heuristics, search strategies, etc.) (68T20) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Computational methods for problems pertaining to biology (92-08) Algorithms on strings (68W32)

Cited In (7)

• A scheme for multiple sequence alignment optimization -- an improvement based on family representative mechanics features
• MoDEL: an efficient strategy for ungapped local multiple alignment
• Title not available (Why is that?)
• A genetic algorithm on multiple sequences alignment problems in biology
• Title not available (Why is that?)
• Title not available (Why is that?)
• Extended pairwise local alignment of wild card DNA/RNA sequences using dynamic programming

This page was built for publication: Pairwise sequence alignment revisited -- genetic algorithms and cosine functions

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2808615)