Javaplex: a research software package for persistent (co)homology
DOI10.1007/978-3-662-44199-2_23zbMATH Open1402.65186OpenAlexW107886322MaRDI QIDQ2879112FDOQ2879112
Authors: Henry Adams, Andrew Tausz, Mikael Vejdemo Johansson 
Publication date: 8 September 2014
Published in: Mathematical Software – ICMS 2014 (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/978-3-662-44199-2_23
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Packaged methods for numerical algorithms (65Y15) Symbolic computation and algebraic computation (68W30) Homology and homotopy of topological groups and related structures (57Txx)
Cited In (47)
- Essential Simplices in Persistent Homology and Subtle Admixture Detection
- Embedding and approximation theorems for echo state networks
- Object-oriented persistent homology
- Topological data analysis of Korean music in Jeongganbo: a cycle structure
- A fractal dimension for measures via persistent homology
- BPS spectra, barcodes and walls
- A primer on persistent homology of finite metric spaces
- Topological data analysis for the string landscape
- Applying topological data analysis to local search problems
- Topology of the mesoscale connectome of the mouse brain
- Principal component analysis of persistent homology rank functions with case studies of spatial point patterns, sphere packing and colloids
- Weighted persistent homology
- Persistent homology and string vacua
- An introduction to persistent homology for time series
- Using persistent homology and dynamical distances to analyze protein binding
- A functorial Dowker theorem and persistent homology of asymmetric networks
- Aspects of topological approaches for data science
- Learning orientations: a discrete geometry model
- A topological approach for protein classification
- Evolutionary homology on coupled dynamical systems with applications to protein flexibility analysis
- Computing hypergraph homology
- Sliding windows and persistence: an application of topological methods to signal analysis
- javaPlex
- jHoles: a tool for understanding biological complex networks via clique weight rank persistent homology
- Geometric anomaly detection in data
- Topological data analysis for the energy and stability of endohedral metallofullerenes
- Topological characterization and early detection of bifurcations and chaos in complex systems using persistent homology
- PHAT -- persistent homology algorithms toolbox
- \textsc{Phat} -- persistent homology algorithms toolbox
- Graph based analysis for gene segment organization in a scrambled genome
- Peristaltic flows: a quantitative measure for the size of a bolus
- New families of stable simplicial filtration functors
- A social communication model based on simplicial complexes
- Generalized penalty for circular coordinate representation
- Topological measurement of deep neural networks using persistent homology
- Bifurcation and chaos analysis of a fractional-order delay financial risk system using dynamic system approach and persistent homology
- Ripser: efficient computation of Vietoris-Rips persistence barcodes
- Topology of dynamical reconstructions from Lagrangian data
- Multiscale persistent functions for biomolecular structure characterization
- Simplicial complexes and complex systems
- Probing multipartite entanglement through persistent homology
- The Gudhi library: simplicial complexes and persistent homology
- HERMES: persistent spectral graph software
- Geometric metrics for topological representations
- On the topology of random complexes built over stationary point processes
- Decomposing filtered chain complexes: geometry behind barcoding algorithms
- Data science applications to string theory
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