Object-oriented persistent homology
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Publication:2374931
DOI10.1016/j.jcp.2015.10.036zbMath1349.55004arXiv1412.2368OpenAlexW1973076897WikidataQ40170527 ScholiaQ40170527MaRDI QIDQ2374931
Publication date: 5 December 2016
Published in: Journal of Computational Physics (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/1412.2368
Minimal surfaces and optimization (49Q05) Applications of local differential geometry to the sciences (53B50) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10) Variational problems concerning minimal surfaces (problems in two independent variables) (58E12) Other homology theories in algebraic topology (55N35)
Related Items (5)
Multiscale persistent functions for biomolecular structure characterization ⋮ Evolutionary homology on coupled dynamical systems with applications to protein flexibility analysis ⋮ Evolutionary de Rham-Hodge method ⋮ Supervised learning with indefinite topological Kernels ⋮ Topological data analysis for the energy and stability of endohedral metallofullerenes
Uses Software
Cites Work
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- Nonlinear total variation based noise removal algorithms
- Multiscale geometric modeling of macromolecules. I: Cartesian representation
- Operator splitting ADI schemes for pseudo-time coupled nonlinear solvation simulations
- Morse theory for filtrations and efficient computation of persistent homology
- Discrete Morse theoretic algorithms for computing homology of complexes and maps
- A fast algorithm for constructing topological structure in large data
- Mode decomposition evolution equations
- Second-order Poisson-Nernst-Planck solver for ion transport
- A numerical method for computing minimal surfaces in arbitrary dimension
- Differential geometry based solvation model. I: Eulerian formulation
- A Mayer-Vietoris formula for persistent homology with an application to shape recognition in the presence of occlusions
- Differential geometry based solvation model II: Lagrangian formulation
- Differential geometry based multiscale models
- Geometric and potential driving formation and evolution of biomolecular surfaces
- Existence and uniqueness of weak solutions for a fourth-order nonlinear parabolic equation
- On the local behavior of spaces of natural images
- Localized homology
- Strong solutions for the generalized Perona-Malik equation for image restoration
- Fronts propagating with curvature-dependent speed: Algorithms based on Hamilton-Jacobi formulations
- Geodesic active contours
- Semi-implicit level set methods for curvature and surface diffusion motion
- Computational homology
- \(H^ 1\) solutions of a class of fourth order nonlinear equations for image processing.
- Computing persistent homology
- Subjective surfaces: A geometric model for boundary completion
- Topological persistence and simplification
- Reeb graphs: approximation and persistence
- A topological measurement of protein compressibility
- Computing minimal surfaces via level set curvature flow
- A statistical approach to persistent homology
- Quality meshing of implicit solvation models of biomolecular structures
- javaPlex: A Research Software Package for Persistent (Co)Homology
- Pseudo-time-coupled nonlinear models for biomolecular surface representation and solvation analysis
- Partial differential equation transform-Variational formulation and Fourier analysis
- Biomolecular surface construction by PDE transform
- Quantum dynamics in continuum for proton transport II: Variational solvent-solute interface
- Efficient Computation of Persistent Homology for Cubical Data
- Optimal approximations by piecewise smooth functions and associated variational problems
- A Topological View of Unsupervised Learning from Noisy Data
- Feature-Oriented Image Enhancement Using Shock Filters
- Persistent homology of complex networks
- Topology and data
- Analysis of a fully discrete finite element method for the phase field model and approximation of its sharp interface limits
- A general framework for low level vision
- Traveling Wave Solutions of Fourth Order PDEs for Image Processing
- A direct method for solving an anisotropic mean curvature flow of plane curves with an external force
- Variational Multiscale Models for Charge Transport
- Barcodes: The persistent topology of data
- Level set methods: An overview and some recent results
- Evolution, implementation, and application of level set and fast marching methods for advancing fronts
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