Geometric and potential driving formation and evolution of biomolecular surfaces
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Biochemistry, molecular biology (92C40) Optimization of shapes other than minimal surfaces (49Q10) Minimal surfaces in differential geometry, surfaces with prescribed mean curvature (53A10) Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10) Classical flows, reactions, etc. in chemistry (92E20)
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- scientific article; zbMATH DE number 490080 (Why is no real title available?)
- scientific article; zbMATH DE number 1796913 (Why is no real title available?)
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Cited in
(34)- Mode decomposition evolution equations
- A constrained variational model of biomolecular solvation and its numerical implementation
- A unified discontinuous Galerkin framework for time integration
- Multiscale molecular dynamics using the matched interface and boundary method
- High-order fractional partial differential equation transform for molecular surface construction
- A matched Peaceman-Rachford ADI method for solving parabolic interface problems
- Differential geometry based solvation model II: Lagrangian formulation
- Partial differential equation transform -- variational formulation and Fourier analysis
- Pseudo-time-coupled nonlinear models for biomolecular surface representation and solvation analysis
- Multiscale geometric modeling of macromolecules. I: Cartesian representation
- Multiscale models of compact bone
- Stability of a Cylindrical Solute-Solvent Interface: Effect of Geometry, Electrostatics, and Hydrodynamics
- Fully implicit ADI schemes for solving the nonlinear Poisson-Boltzmann equation
- A super-Gaussian Poisson-Boltzmann model for electrostatic free energy calculation: smooth dielectric distribution for protein cavities and in both water and vacuum states
- Object-oriented persistent homology
- Dynamic maintenance of molecular surfaces under conformational changes
- Second-order Poisson-Nernst-Planck solver for ion transport
- Differential geometry based multiscale models
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- Calculation of electrostatic free energy for the nonlinear Poisson-Boltzmann model based on the dimensionless potential
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