Bayesian feature allocation models for tumor heterogeneity

DOI10.1007/978-3-319-27099-9_10MaRDI QIDQ2956751zbMATH OpenOpenAlexFDO

Authors Juhee Lee, P. Müller, Subhajit Sengupta, Kamalakar Gulukota, Yuan Ji

Publication date 19 January 2017

Published in Statistical Analysis for High-Dimensional Data (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-319-27099-9_10

zbMATH Keywords

Indian buffet processcopy number variantslatent haplotypessingle nucleotide variations

Mathematics Subject Classification ID

Bayesian inference (62F15) Applications of statistics to biology and medical sciences; meta analysis (62P10) Medical applications (general) (92C50)

Recommendations

• A Bayesian feature allocation model for tumor heterogeneity
• Estimating Latent Cell Subpopulations with Bayesian Feature Allocation Models
• MAD Bayes for tumor heterogeneity -- feature allocation with exponential family sampling
• A Bayesian nonparametric model for inferring subclonal populations from structured DNA sequencing data
• Phylogeny-based tumor subclone identification using a Bayesian feature allocation model

Cited in

(14)

• TreeClone: reconstruction of tumor subclone phylogeny based on mutation pairs using next generation sequencing data
• MAD Bayes for tumor heterogeneity -- feature allocation with exponential family sampling
• Estimating Latent Cell Subpopulations with Bayesian Feature Allocation Models
• Phylogeny-based tumor subclone identification using a Bayesian feature allocation model
• Variational Bayes procedure for effective classification of tumor type with microarray gene expression data
• A Bayesian nonparametric model for inferring subclonal populations from structured DNA sequencing data
• Bayesian Edge Regression in Undirected Graphical Models to Characterize Interpatient Heterogeneity in Cancer
• Bayesian Hierarchical Varying-Sparsity Regression Models with Application to Cancer Proteogenomics
• A Bayesian feature allocation model for tumor heterogeneity
• Bayesian Double Feature Allocation for Phenotyping With Electronic Health Records
• A Bayesian screening approach for hepatocellular carcinoma using multiple longitudinal biomarkers
• A phylogenetic latent feature model for clonal deconvolution
• Ancestral inference in tumors: how much can we know?
• Baycount: a Bayesian decomposition method for inferring tumor heterogeneity using RNA-seq counts

This page was built for publication: Bayesian feature allocation models for tumor heterogeneity

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2956751)