SIMILARITIES/DISSIMILARITIES ANALYSIS OF PROTEIN SEQUENCES BASED ON PCA-FFT

DOI10.1142/S0218339017500024zbMath1360.92079MaRDI QIDQ2977593

Xianyou Zhu, Lei Wang, Pengyao Ping

Publication date: 18 April 2017

Published in: Journal of Biological Systems (Search for Journal in Brave)

zbMATH Keywords

time seriesprincipal component analysisfast Fourier transformationprotein sequencesimilarity/dissimilarity analysis

Mathematics Subject Classification ID

Time series, auto-correlation, regression, etc. in statistics (GARCH) (62M10) Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

Uses Software

• ClustalW
• 2D-MH

Cites Work

• 2D-MH: a web-server for generating graphic representation of protein sequences based on the physicochemical properties of their constituent amino acids
• ADLD: a novel graphical representation of protein sequences and its application
• A novel descriptor of protein sequences and its application

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