A novel descriptor of protein sequences and its application

DOI10.1016/J.JTBI.2014.01.001MaRDI QIDQ2632618zbMATH OpenOpenAlexWikidataFDO

Authors Yuhua Yao, Shoujiang Yan, Jianning Han, Qi Dai, Pingan He

Publication date 15 May 2019

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2014.01.001

zbMATH Keywords

graphical representationprotein descriptorsimilarities/dissimilarities

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

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Cites work

• A network-QSAR model for prediction of genetic-component biomarkers in human colorectal cancer
• Alignment-free prediction of mycobacterial DNA promoters based on pseudo-folding lattice network or star-graph topological indices
• Classification studies based on a spectral representation of DNA
• Four-component spectral representation of DNA sequences
• Generalized lattice graphs for 2D-visualization of biological information
• Graphical and numerical representations of DNA sequences: Statistical aspects of similarity
• scientific article; zbMATH DE number 5619537 (Why is no real title available?)
• scientific article; zbMATH DE number 5627528 (Why is no real title available?)
• Invariants of DNA sequences based on 2DD-curves
• New 3D graphical representation of DNA sequence based on dual nucleotides

Cited in

(15)

• Comparative analysis of protein primary sequences with graph energy
• Similarity analysis of protein sequences based on a new graphical representation method
• A novel model for protein sequence similarity analysis based on spectral radius
• A 3D graphical representation of protein sequences based on the Gray code
• Characterization of protein primary sequences based on partial ordering
• DV-curve representation of protein sequences and its application
• ADLD: a novel graphical representation of protein sequences and its application
• A time series representation of protein sequences for similarity comparison
• Similarities/dissimilarities analysis of protein sequences based on PCA-FFT
• An estimator for local analysis of genome based on the minimal absent word
• A new 2D graphical representation of protein sequence and its application
• Peptides multivariate characterisation using a molecular descriptor based approach
• F-curve, a graphical representation of protein sequences for similarity analysis based on physicochemical properties of amino acids
• Novel matrix descriptor for determination of the connectivity of secondary structure segments in proteins. Analysis of general properties using graph theory
• Protein Sequence Comparison Method Based on 3-ary Huffman Coding

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