Enhancing the lasso approach for developing a survival prediction model based on gene expression data

DOI10.1155/2015/259474MaRDI QIDQ308770zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Shuhei Kaneko, Akihiro Hirakawa, Chikuma Hamada

Publication date 6 September 2016

Published in Computational \& Mathematical Methods in Medicine (Search for Journal in Brave)

Copyright license Creative Commons Attribution 3.0 Unported

Full work available at URL https://doi.org/10.1155/2015/259474

zbMATH Keywords

cross-validationleast absolute shrinkageselection operatortrue positive genes

Mathematics Subject Classification ID

Medical applications (general) (92C50) Genetics and epigenetics (92D10)

Recommendations

• An integrative pathway-based clinical-genomic model for cancer survival prediction
• Survival prediction using gene expression data: a review and comparison
• Network-based survival analysis to discover target genes for developing cancer immunotherapies and predicting patient survival
• PLS-frailty model for cancer survival analysis based on gene expression profiles
• Survival prediction with gene expression profiles

Cites work

• scientific article; zbMATH DE number 845714 (Why is no real title available?)
• scientific article; zbMATH DE number 3385132 (Why is no real title available?)
• L 1-Regularization Path Algorithm for Generalized Linear Models
• Least angle regression. (With discussion)
• Regularization and Variable Selection Via the Elastic Net
• Survival prediction using gene expression data: a review and comparison
• Univariate shrinkage in the Cox model for high dimensional data
• \(L_{1}\) penalized estimation in the Cox proportional hazards model

Cited in

(7)

• LCox: a tool for selecting genes related to survival outcomes using longitudinal gene expression data
• Network-based survival analysis to discover target genes for developing cancer immunotherapies and predicting patient survival
• Lasso logistic regression, GSoft and the cyclic coordinate descent algorithm: application to gene expression data
• An integrative pathway-based clinical-genomic model for cancer survival prediction
• scientific article; zbMATH DE number 5262704 (Why is no real title available?)
• PLS-frailty model for cancer survival analysis based on gene expression profiles
• Identification of survival relevant genes with measurement error in gene expression incorporated

Describes a project that uses

Uses Software

• uniCox

This page was built for publication: Enhancing the lasso approach for developing a survival prediction model based on gene expression data

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q308770)