Network-based survival analysis to discover target genes for developing cancer immunotherapies and predicting patient survival

DOI10.1080/02664763.2020.1812543MaRDI QIDQ5861604zbMATH OpenOpenAlexWikidataFDO

Authors Xinwei He, Xiaoqiang Sun, Yongzhao Shao

Publication date 1 March 2022

Published in Journal of Applied Statistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1080/02664763.2020.1812543

zbMATH Keywords

multicellular gene networkpredictive modelssurvival modelstime-dependent ROCs and AUCstreatment resistanceWGCNA

Mathematics Subject Classification ID

Applications of statistics (62Pxx)

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Cites work

• A General Framework for Weighted Gene Co-Expression Network Analysis
• Emergence of Scaling in Random Networks
• scientific article; zbMATH DE number 3385132 (Why is no real title available?)
• Network-regularized high-dimensional Cox regression for analysis of genomic data
• Survival prediction using gene expression data: a review and comparison

Cited in

(8)

• A network approach to quantifying radiotherapy effect on cancer: radiosensitive gene group centrality
• Immune classification of osteosarcoma
• Bioinformatics analysis revealed hub genes and pathways involved in sorafenib resistance in hepatocellular carcinoma
• Enhancing the lasso approach for developing a survival prediction model based on gene expression data
• A combination model of robust principal component analysis and multiple kernel learning for cancer patient stratification
• Editorial to special issue frontiers of data analysis
• Integrated partially linear model for multi-centre studies with heterogeneity and batch effect in covariates
• A muti-modal feature fusion method based on deep learning for predicting immunotherapy response

Describes a project that uses

Uses Software

• dynamicTreeCut
• WGCNA

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