dynamicTreeCut

swMATH12570CRANdynamicTreeCutMaRDI QIDQ24497FDOQ24497

Methods for Detection of Clusters in Hierarchical Clustering Dendrograms

Peter Langfelder And Bin Zhang

Last update: 11 March 2016

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 1.63-1

Official website: https://cran.r-project.org/web/packages/dynamicTreeCut/index.html

Source code repository: https://github.com/cran/dynamicTreeCut

Cited In (40)

• phytoclass
• Network-based survival analysis to discover target genes for developing cancer immunotherapies and predicting patient survival
• Review on statistical methods for gene network reconstruction using expression data
• Assessing modularity using a random matrix theory approach
• A permutation test for determining significance of clusters with applications to spatial and gene expression data
• Convex biclustering
• Sparse factor model for co-expression networks with an application using prior biological knowledge
• A group analysis using the multiregression dynamic models for fMRI networked time series
• Principal component analysis and clustering on manifolds
• An automatic method to determine the number of clusters using decision-theoretic rough set
• Clustering using an improved krill herd algorithm
• EDA
• WGCNA
• PHENIX
• Auditory Toolbox
• rastamat
• clusterRepro
• Knorm
• wskm
• idendr0
• gcExplorer
• MRPC
• CLUSTAG
• GenClust
• Clustering of high throughput gene expression data
• scca
• Block-Wise Variable Selection for Clustering Via Latent States of Mixture Models
• Vega
• bioregion
• protoshiny
• Towards a topological fingerprint of music
• moduleColor
• RAMClustR
• MitoHEAR
• Inferring gene-gene interactions and functional modules using sparse canonical correlation analysis
• linkcomm
• PropClust
• eclust
• Application of biostatistics and bioinformatics tools to identify putative transcription factor-gene regulatory network of ankylosing spondylitis and sarcoidosis
• A method for generating realistic correlation matrices

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