Fast and accurate approximation to significance tests in genome-wide association studies
DOI10.1198/JASA.2011.AP10657zbMATH Open1229.62150OpenAlexW2055795617WikidataQ39465541 ScholiaQ39465541MaRDI QIDQ3111180FDOQ3111180
Authors: Yu Zhang, Jun S. Liu 
Publication date: 18 January 2012
Published in: Journal of the American Statistical Association (Search for Journal in Brave)
Full work available at URL: http://nrs.harvard.edu/urn-3:HUL.InstRepos:27002085
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Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Paired and multiple comparisons; multiple testing (62J15)
Cited In (17)
- Rapid and accurate estimates of statistical significance for sequence data base searches.
- Fast approximation of small \(p\)-values in permutation tests by partitioning the permutations
- Segmentation and estimation of change-point models: false positive control and confidence regions
- A geometric interpretation of the permutation \(p\)-value and its application in eQTL studies
- Efficient evaluation of ranking procedures when the number of units is large, with application to SNP identification
- Simultaneous set-wise testing under dependence, with applications to genome-wide association studies
- Accurate and flexible power calculations on the spot: applications to genomic research
- Eigenvalue significance testing for genetic association
- RANK: Large-Scale Inference With Graphical Nonlinear Knockoffs
- Fast implementation of a scan statistic for identifying chromosomal patterns of genome wide association studies
- Detecting Local High-Scoring Segments: a First-Stage Approach for Genome-Wide Association Studies
- Sample size and power analysis for sparse signal recovery in genome-wide association studies
- Robust methods to detect disease-genotype association in genetic association studies: calculate \(p\)-values using exact conditional enumeration instead of simulated permutations or asymptotic approximations
- Evaluating the accuracy of small \(p\)-values in genetic association studies using Edgeworth expansions
- Statistical significance for genomewide studies
- Computationally efficient familywise error rate control in genome-wide association studies using score tests for generalized linear models
- Efficient identification of context dependent subgroups of risk from genome-wide association studies
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