CAVE-CL: an OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: application to proteins

DOI10.1016/j.cpc.2014.12.017zbMath1344.92005WikidataQ58429340 ScholiaQ58429340MaRDI QIDQ311623

Ján Buša, Shura Hayryan, Chin-Kun Hu, Ján jun. Buša, Ming-Chya Wu

Publication date: 13 September 2016

Published in: Computer Physics Communications (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.cpc.2014.12.017

zbMATH Keywords

OpenCL; protein; cavity

Mathematics Subject Classification ID

92C40: Biochemistry, molecular biology

92D20: Protein sequences, DNA sequences

92C05: Biophysics

92-04: Software, source code, etc. for problems pertaining to biology

Uses Software

• OpenCL
• CAVE
• CAVE-CL