Modeling angles in proteins and circular genomes using multivariate angular distributions based on multiple nonnegative trigonometric sums

DOI10.1515/sagmb-2012-0012zbMath1296.92032OpenAlexW2321973576WikidataQ30357530 ScholiaQ30357530MaRDI QIDQ3191805

Juan José Fernández-Durán, María Mercedes Gregorio-Domínguez

Publication date: 7 October 2014

Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1515/sagmb-2012-0012

zbMATH Keywords

nonnegative trigonometric sumsmultivariate angular data

Mathematics Subject Classification ID

General biostatistics (92B15) Protein sequences, DNA sequences (92D20)

Related Items

Recent advances in directional statistics ⋮ Multivariate-multiple circular regression ⋮ A multivariate circular distribution with applications to the protein structure prediction problem ⋮ Unnamed Item ⋮ Bayesian nonparametrics for directional statistics ⋮ Tractable circula densities from Fourier series ⋮ Multimodal exponential families of circular distributions with application to daily peak hours of PM2.5 level in a large city ⋮ On an approach for evaluating certain trigonometric character sums using the discrete time heat kernel

Uses Software

• R
• CircNNTSR
• CircStats
• circular
• PROCHECK

Cites Work

• A Dirichlet process mixture of hidden Markov models for protein structure prediction
• Maximum likelihood estimation of nonnegative trigonometric sum models using a Newton-like algorithm on manifolds
• Inferences based on a bivariate distribution with von Mises marginals
• Topics in Circular Statistics
• Statistical Analysis of Circular Data
• Circular Distributions Based on Nonnegative Trigonometric Sums
• A multivariate von mises distribution with applications to bioinformatics
• Bivariate models for dependence of angular observations and a related Markov process
• Probabilistic model for two dependent circular variables
• Density Estimation for Protein Conformation Angles Using a Bivariate von Mises Distribution and Bayesian Nonparametrics
• Protein Bioinformatics and Mixtures of Bivariate von Mises Distributions for Angular Data
• Models for Circular-Linear and Circular-Circular Data Constructed from Circular Distributions Based on Nonnegative Trigonometric Sums
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