On amino acid and codon assignment in algebraic models for the genetic code

DOI10.1142/S0217979210054944MaRDI QIDQ3556868zbMATH OpenOpenAlexFDO

Authors Fernando Antoneli, Michael Forger, Paola A. Gaviria, J. E. Hornos

Publication date 26 April 2010

Published in International Journal of Modern Physics B (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1142/s0217979210054944

zbMATH Keywords

evolutionfinite groupsgenetic codeLie groups and Lie algebrasLie superalgebrasspontaneous symmetry breaking

Mathematics Subject Classification ID

Lie algebras of linear algebraic groups (17B45) Genetic algebras (17D92) Lattice systems (Ising, dimer, Potts, etc.) and systems on graphs arising in equilibrium statistical mechanics (82B20) Genetics and epigenetics (92D10)

Recommendations

• On algebraic approaches to the genetic code
• Symmetry and symmetry breaking: an algebraic approach to the genetic code.
• Lie superalgebras and the multiplet structure of the genetic code. I: Codon representations.
• Quantum groups and the genetic code
• An orthosymplectic symmetry for the genetic code

Cites work

• Extending the Search for Symmetries in the Genetic Code
• Lie superalgebras and the multiplet structure of the genetic code. I: Codon representations.
• Lie superalgebras and the multiplet structure of the genetic code. II: Branching schemes.
• Modeling stochastic gene expression under repression
• Symmetry and symmetry breaking: an algebraic approach to the genetic code.
• THE SEARCH FOR SYMMETRIES IN THE GENETIC CODE: FINITE GROUPS

Cited in

(15)

• A geometric model for codon recognition logic
• The genetic code is not an optimal code in a model taking into account both the biosynthetic relationships between amino acids and their physicochemical properties
• The novel ideal symmetry genetic code table -- common purine-pyrimidine symmetry net for all RNA and DNA species
• A harmonic structure of the genetic code
• On the 28-gon symmetry inherent in the genetic code intertwined with aminoacyl-tRNA synthetases -- the Lucas series
• Evolution of the genetic code through progressive symmetry breaking
• Lie superalgebras and the multiplet structure of the genetic code. I: Codon representations.
• Lie superalgebras and the multiplet structure of the genetic code. II: Branching schemes.
• Perspectives in the algebraic approach to the genetic code
• Some algebraic aspects and evolution of genetic code
• RUNS OF AMINO ACIDS ARE LONGER THAN EXPECTED IN PROTEINS BASED ON A GRAPH THEORY REPRESENTATION OF THE GENETIC CODE
• The Chern‐Simons Current in Systems of DNA‐RNA Transcriptions
• Symmetry breaking in the genetic code: finite groups
• Genetic Hotels for the standard genetic code: evolutionary analysis based upon novel three-dimensional algebraic models
• A unifying concept for the amino acid code

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