RNA Secondary Structure Prediction Via Energy Density Minimization

DOI10.1007/11732990_12zbMATH Open1302.92095OpenAlexW1480157726MaRDI QIDQ3596313FDOQ3596313

Authors:

Publication date: 30 August 2007

Published in: Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/11732990_12

Recommendations

• Research in Computational Molecular Biology
• Sparse RNA folding revisited: space-efficient minimum free energy prediction
• Publication:4731051
• On finding all suboptimal foldings of an RNA molecule
• An RNA secondary structure prediction method based on minimum and suboptimal free energy structures

zbMATH Keywords

secondary structurenon-coding RNAenergy density minimizationRNA folding problem

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Cited In (4)

• RNA secondary structures and their prediction
• Dynamic extended folding: modeling the RNA secondary structures during co-transcriptional folding
• An RNA secondary structure prediction method based on minimum and suboptimal free energy structures
• RNA folding pathways and kinetics using 2D energy landscapes

Uses Software

• Densityfold

This page was built for publication: RNA Secondary Structure Prediction Via Energy Density Minimization

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3596313)