Using invariants for phylogenetic tree construction

zbMATH Open1158.92033arXiv0709.2890MaRDI QIDQ3601987FDOQ3601987

Authors: Nicholas Eriksson 

Publication date: 12 February 2009

Full work available at URL: https://arxiv.org/abs/0709.2890

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• scientific article; zbMATH DE number 5247137

zbMATH Keywords

phylogeneticsalgebraic statisticsMahalonobis norm

Mathematics Subject Classification ID

Problems related to evolution (92D15) Trees (05C05) Semidefinite programming (90C22) Gröbner bases; other bases for ideals and modules (e.g., Janet and border bases) (13P10)

Cited In (15)

• Necessary and sufficient conditions for the existence of certain quadratic invariants under a phylogenetic tree
• Determining the number and structure of phylogenetic invariants.
• Phylogenetic trees
• Algebraic tools for evolutionary biology
• Phylogenetics of Indo-European language families via an algebro-geometric analysis of their syntactic structures
• A Covariance Matrix Inversion Problem arising from the Construction of Phylogenetic Trees
• Construction of linear invariants in phylogenetic inference
• Implicit inequality constraints in a binary tree model
• Phylogenetic Networks
• Invariants of phylogenies in a simple case with discrete states
• Phylogenetic invariants for the general Markov model of sequence mutation
• Markov invariants, plethysms, and phylogenetics
• Developing a statistically powerful measure for quartet tree inference using phylogenetic identities and Markov invariants
• Adventures in invariant theory
• Title not available (Why is that?)

Uses Software

• LattE

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