scientific article; zbMATH DE number 5247137

MaRDI QIDQ5449200zbMATH OpenFDO

Authors Elizabeth S. Allman, John A. Rhodes

Publication date 11 March 2008

zbMATH Keywords

Markov models on treesmolecular evolutionphylogenetic invariantsphylogenetics

Mathematics Subject Classification ID

Gröbner bases; other bases for ideals and modules (e.g., Janet and border bases) (13P10) Markov processes (60J99) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Problems related to evolution (92D15)

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Cited in

(22)

• Determining the number and structure of phylogenetic invariants.
• Maximum likelihood estimation of symmetric group-based models via numerical algebraic geometry
• Algebraic tools for evolutionary biology
• Phylosymmetric algebras: mathematical properties of a new tool in phylogenetics
• Identifiability in phylogenetics using algebraic matroids
• Topics on phylogenetic algebraic geometry
• Closure operations in phylogenetics
• A note on probabilistic models over strings: the linear algebra approach
• First steps toward the geometry of cophylogeny
• Secant varieties of \({\mathbb {P}^1}\times \cdots \times {\mathbb {P}^1} (n\)-times) are not defective for \(n \geq 5\)
• A semialgebraic description of the general Markov model on phylogenetic trees
• A Mathematical Primer of Molecular Phylogenetics
• Using invariants for phylogenetic tree construction
• Kimura's evolutive model: a linkage between algebra, statistics and biology
• Phylogenetics
• An algebraic view of bacterial genome evolution
• Spectral neighbor joining for reconstruction of latent tree models
• Stochastic models of molecular evolution: An algebraical and statistical analysis.
• Phylogenetic algebraic geometry
• Systematics and symmetry in molecular phylogenetic modelling: perspectives from physics
• A novel algebraic approach to time-reversible evolutionary models
• Phylogenetic reconstruction based on algebra

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