Phylogenetic analysis of nucleotide sequences: An algebraic approach

DOI10.1016/S0025-5564(98)10039-1MaRDI QIDQ1307066zbMATH OpenOpenAlexWikidataFDO

Authors Willi Schmidt

Publication date 9 July 2000

Published in Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/s0025-5564(98)10039-1

zbMATH Keywords

additive treesalgorithmnucleotide sequencespartitionsphylogenetic treessubstitutions modelstransitionstransversions

Mathematics Subject Classification ID

Problems related to evolution (92D15) Protein sequences, DNA sequences (92D20)

Recommendations

• Preface. Algebraic methods in phylogenetics
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• Algorithms for phylogeny reconstruction in a new mathematical model
• The Mathematics of Phylogenomics
• Reconstructing phylogenies from nucleotide pattern probabilities: A survey and some new results

Cites work

• A combinatorial description of the closest tree algorithm for finding evolutionary trees
• A distance measure based on binary character data and its application to phylogeny reconstruction
• Mixed Model Analysis of DNA Sequence Evolution

Cited in

(6)

• Phylogenetic inference from binary sequences reduced by primary DNA sequences
• Phylogenetic inferences from molecular sequences: Review and critique
• Fuzzy classification of nucleotide sequences and bacterial evolution
• Novel algorithm for phylogenetic analysis of proteins: application to analysis of the evolution of H5N1 influenza viruses
• scientific article; zbMATH DE number 756195 (Why is no real title available?)
• scientific article; zbMATH DE number 5247137 (Why is no real title available?)

Describes a project that uses

Uses Software

• fastDNAml
• PAUP*

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