The empirical discovery of phylogenetic invariants

DOI10.2307/1427653zbMATH Open0771.92013OpenAlexW2160729680MaRDI QIDQ5286945FDOQ5286945

Authors: Vincent Ferretti, David Sankoff 

Publication date: 20 September 1993

Published in: Advances in Applied Probability (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.2307/1427653

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zbMATH Keywords

DNA sequencesinvariancesymbolic computationevolutionary treequadratic invariants\(k\)-state Markov modeledge-length configurationsJukes-Cantor type of Markov matrixsmallest algebraically independent set of invariantsunrooted binary trees with four terminals

Mathematics Subject Classification ID

Problems related to evolution (92D15) Symbolic computation and algebraic computation (68W30) Continuous-time Markov processes on discrete state spaces (60J27)

Cited In (11)

• Determining the number and structure of phylogenetic invariants.
• Using invariants for phylogenetic tree construction
• Identical inferences about correlated evolution arise from ancestral state reconstruction and independent contrasts
• A remarkable nonlinear invariant for evolution with heterogeneous rates
• A Fourier inversion formula for evolutionary trees
• Relevant phylogenetic invariants of evolutionary models
• Invariants of phylogenies in a simple case with discrete states
• Phylogenetic invariants for the general Markov model of sequence mutation
• Title not available (Why is that?)
• Phylogenetic ideals and varieties for the general Markov model
• Topics on phylogenetic algebraic geometry

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