Phylogenetic ideals and varieties for the general Markov model
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Publication:2474251
DOI10.1016/j.aam.2006.10.002zbMath1131.92046arXivmath/0410604OpenAlexW2022954425MaRDI QIDQ2474251
Elizabeth S. Allman, John A. Rhodes
Publication date: 5 March 2008
Published in: Advances in Applied Mathematics (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/math/0410604
Problems related to evolution (92D15) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Computational aspects in algebraic geometry (14Q99)
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Cites Work
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- Rank and optimal computation of generic tensors
- Invariants of phylogenies in a simple case with discrete states
- Fourier calculus on evolutionary trees
- Phylogenetic invariants for the general Markov model of sequence mutation
- On the ideals of secant varieties of Segre varieties
- Invariants of some probability models used in phylogenetic inference
- Algebraic geometry of Bayesian networks
- Phylogenetic invariants for stationary base composition
- Statistical Inference of Phylogenies
- Toric Ideals of Phylogenetic Invariants
- Tropical geometry of statistical models
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