Low degree equations for phylogenetic group-based models
From MaRDI portal
Publication:2345583
DOI10.1007/s13348-014-0120-0zbMath1332.92040arXiv1402.6945OpenAlexW2031916210WikidataQ61068396 ScholiaQ61068396MaRDI QIDQ2345583
Jesús Fernández-Sánchez, Mateusz Michałek, Marta Casanellas
Publication date: 22 May 2015
Published in: Collectanea Mathematica (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/1402.6945
Problems related to evolution (92D15) Applications of graph theory (05C90) Abelian groups (20K99) Curves in algebraic geometry (14H99)
Related Items
Local equations for equivariant evolutionary models, Finite phylogenetic complexity of \(\mathbb{Z}_p\) and invariants for \(\mathbb{Z}_3\), Phylogenetic invariants for \(\mathbb{Z}_3\) scheme-theoretically, H-Representation of the Kimura-3 Polytope for the $m$-Claw Tree, Distance to the stochastic part of phylogenetic varieties, Maximum likelihood estimation of symmetric group-based models via numerical algebraic geometry, Normality of the Kimura 3-Parameter Model
Cites Work
- Unnamed Item
- Unnamed Item
- Unnamed Item
- Unnamed Item
- Geometry of phylogenetic group-based models
- Relevant phylogenetic invariants of evolutionary models
- Geometry of the Kimura 3-parameter model
- On the ideals of equivariant tree models
- Full reconstruction of Markov models on evolutionary trees: identifiability and consistency.
- A unique exchange property for bases
- Phylogenetic invariants for the general Markov model of sequence mutation
- Algebraic tools for evolutionary biology
- Constructive degree bounds for group-based models
- On the toric ideal of a matroid
- Phylogenetic invariants for stationary base composition
- Toric fiber products
- On geometry of binary symmetric models of phylogenetic trees
- Phylogenetic ideals and varieties for the general Markov model
- Phylogenetic invariants for group-based models
- Introduction to Toric Varieties. (AM-131)
- Toric Ideals of Phylogenetic Invariants
- Toric geometry of the 3-Kimura model for any tree
- Toric Ideals of Phylogenetic Invariants for the General Group-Based Model on Claw Trees K 1,n
- Tropical geometry of statistical models
- The quest for counterexamples in toric geometry
- Algebraic Statistics for Computational Biology
