| Publication | Date of Publication | Type |
|---|
The identifiability of tree topology for phylogenetic models, including covarion and mixture models
(available as arXiv preprint) | N/A | Paper |
Identifying circular orders for blobs in phylogenetic networks
(available as arXiv preprint) | N/A | Paper |
| MSCsimtester | 2026-08-22 | Software |
| MSCquartets | 2026-05-28 | Software |
Correction to: ``Distinguishing phylogenetic level-2 networks with quartets and inter-taxon quartet distances''
Bulletin of Mathematical Biology | 2026-01-26 | Paper |
Identifiability of phylogenetic networks and quintet concordance factors
(available as arXiv preprint) | 2026-01-01 | Paper |
Defining the Crick-Franklin-Watson genes of any robot (equals a finite state machine) and defining the Shannon genetic code attached to each gene. We also define the Krohn-Rhodes complexity of any regular maximal prefix code
(available as arXiv preprint) | 2026-01-01 | Paper |
Distinguishing phylogenetic level-2 networks with quartets and inter-taxon quartet distances
Bulletin of Mathematical Biology | 2025-11-17 | Paper |
Beyond level-1: identifiability of a class of galled tree-child networks
Bulletin of Mathematical Biology | 2025-11-17 | Paper |
Identifying circular orders for blobs in phylogenetic networks
Advances in Applied Mathematics | 2024-12-23 | Paper |
Identifiability of level-1 species networks from gene tree quartets
Bulletin of Mathematical Biology | 2024-09-10 | Paper |
Anomalous networks under the multispecies coalescent: theory and prevalence
Journal of Mathematical Biology | 2024-03-05 | Paper |
Phylogenomic Models from Tree Symmetries
SIAM Journal on Applied Algebra and Geometry | 2024-02-27 | Paper |
Testing Multispecies Coalescent Simulators Using Summary Statistics
IEEE/ACM Transactions on Computational Biology and Bioinformatics | 2023-03-01 | Paper |
The tree of blobs of a species network: identifiability under the coalescent
Journal of Mathematical Biology | 2022-12-08 | Paper |
Identifiability of species network topologies from genomic sequences using the logDet distance
Journal of Mathematical Biology | 2022-04-13 | Paper |
| Gene tree discord, simplex plots, and statistical tests under the coalescent | 2021-02-18 | Dataset |
Topological Metrizations of Trees, and New Quartet Methods of Tree Inference
IEEE/ACM Transactions on Computational Biology and Bioinformatics | 2020-11-01 | Paper |
MSCquartets 1.0: quartet methods for species trees and networks under the multispecies coalescent model in R
Bioinformatics | 2020-10-08 | Paper |
Inferring metric trees from weighted quartets via an intertaxon distance
Bulletin of Mathematical Biology | 2020-08-12 | Paper |
Inferring Metric Trees from Weighted Quartets via an Intertaxon Distance
Bulletin of Mathematical Biology | 2020-07-01 | Paper |
| Gene tree discord, simplex plots, and statistical tests under the coalescent | 2020-02-13 | Paper |
NANUQ: a method for inferring species networks from gene trees under the coalescent model
Algorithms for Molecular Biology | 2019-12-01 | Paper |
Hypothesis testing near singularities and boundaries
Electronic Journal of Statistics | 2019-08-06 | Paper |
Hypothesis testing near singularities and boundaries
Electronic Journal of Statistics | 2019-08-06 | Paper |
Species Tree Inference from Genomic Sequences Using the Log-Det Distance
SIAM Journal on Applied Algebra and Geometry | 2019-05-08 | Paper |
Estimating trees from filtered data: identifiability of models for morphological phylogenetics
Journal of Theoretical Biology | 2019-02-04 | Paper |
Hypothesis testing near singularities and boundaries
Electronic Journal of Statistics | 2019-01-01 | Paper |
Hypothesis testing near singularities and boundaries
Electronic Journal of Statistics | 2019-01-01 | Paper |
| Phylogenetics | 2018-10-09 | Paper |
Determining species tree topologies from clade probabilities under the coalescent
Journal of Theoretical Biology | 2018-09-24 | Paper |
Split probabilities and species tree inference under the multispecies coalescent model
Bulletin of Mathematical Biology | 2018-03-21 | Paper |
Split probabilities and species tree inference under the multispecies coalescent model
Bulletin of Mathematical Biology | 2018-03-21 | Paper |
Phylogenetic trees and Euclidean embeddings
Journal of Mathematical Biology | 2017-01-25 | Paper |
There are no caterpillars in a wicked forest
Theoretical Population Biology | 2016-08-03 | Paper |
Tensors of nonnegative rank two
Linear Algebra and its Applications | 2015-05-06 | Paper |
A semialgebraic description of the general Markov model on phylogenetic trees
SIAM Journal on Discrete Mathematics | 2014-09-26 | Paper |
| Parameter identifiability of discrete Bayesian networks with hidden variables | 2014-06-02 | Paper |
Parameter identifiability of discrete Bayesian networks with hidden variables
(available as arXiv preprint) | 2014-01-01 | Paper |
Tensor rank, invariants, inequalities, and applications
SIAM Journal on Matrix Analysis and Applications | 2013-12-13 | Paper |
Identifiability of large phylogenetic mixture models
Bulletin of Mathematical Biology | 2012-05-14 | Paper |
Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent
Journal of Mathematical Biology | 2012-02-09 | Paper |
Trees, Fast and Accurate
Science | 2011-11-30 | Paper |
Parameter identifiability in a class of random graph mixture models
Journal of Statistical Planning and Inference | 2011-03-08 | Paper |
A concise proof of Kruskal's theorem on tensor decomposition
Linear Algebra and its Applications | 2010-03-01 | Paper |
Identifiability of parameters in latent structure models with many observed variables
The Annals of Statistics | 2009-12-09 | Paper |
| Identifiability of 2-tree mixtures for group-based models | 2009-09-09 | Paper |
Identifiability of 2-tree mixtures for group-based models
(available as arXiv preprint) | 2009-01-01 | Paper |
Identifiability of a Markovian model of molecular evolution with gamma-distributed rates
Advances in Applied Probability | 2008-05-15 | Paper |
Identifying evolutionary trees and substitution parameters for the general Markov model with invariable sites
Mathematical Biosciences | 2008-03-12 | Paper |
| scientific article; zbMATH DE number 5247137 (Why is no real title available?) | 2008-03-11 | Paper |
Phylogenetic ideals and varieties for the general Markov model
Advances in Applied Mathematics | 2008-03-05 | Paper |
Phylogenetic invariants for stationary base composition
Journal of Symbolic Computation | 2007-10-23 | Paper |
scientific article; zbMATH DE number 2220791 (Why is no real title available?)
Applied Mathematics Research eXpress | 2005-10-31 | Paper |
| Relativistic velocity space, Wigner rotation and Thomas precession | 2005-01-24 | Paper |
Relativistic velocity space, Wigner rotation and Thomas precession
(available as arXiv preprint) | 2005-01-01 | Paper |
Hecke operators for GL<sub>n</sub>and buildings
Acta Arithmetica | 2004-08-18 | Paper |
| Mathematical Models in Biology | 2004-02-12 | Paper |
Rationality theorems for Hecke operators on GL\(_n\).
Journal of Number Theory | 2004-01-12 | Paper |
Phylogenetic invariants for the general Markov model of sequence mutation
Mathematical Biosciences | 2004-01-06 | Paper |
Automorphic forms, definite quaternion algebras, and Atkin-Lehner theory on trees
Journal of Number Theory | 2002-06-18 | Paper |
The theta multiplier for number fields via p-adic planes
Pacific Journal of Mathematics | 1997-07-24 | Paper |
p-Adic Hyperbolic Planes and Modular Forms
Transactions of the American Mathematical Society | 1995-09-27 | Paper |
Sequences of metrics on compact Riemann surfaces
Duke Mathematical Journal | 1994-11-01 | Paper |
