John A. Rhodes

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List of research outcomes

This list is not complete and representing at the moment only items from zbMATH Open and arXiv. We are working on additional sources - please check back here soon!

PublicationDate of PublicationType
Identifying circular orders for blobs in phylogenetic networks
Advances in Applied Mathematics
2024-12-23Paper
Identifiability of level-1 species networks from gene tree quartets
Bulletin of Mathematical Biology
2024-09-10Paper
Anomalous networks under the multispecies coalescent: theory and prevalence
Journal of Mathematical Biology
2024-03-05Paper
Phylogenomic Models from Tree Symmetries
SIAM Journal on Applied Algebra and Geometry
2024-02-27Paper
MSCquartets2023-10-27Software
The tree of blobs of a species network: identifiability under the coalescent
Journal of Mathematical Biology
2022-12-08Paper
Identifiability of species network topologies from genomic sequences using the logDet distance
Journal of Mathematical Biology
2022-04-13Paper
Gene tree discord, simplex plots, and statistical tests under the coalescent2021-02-18Dataset
Topological Metrizations of Trees, and New Quartet Methods of Tree Inference
IEEE/ACM Transactions on Computational Biology and Bioinformatics
2020-11-01Paper
MSCquartets 1.0: quartet methods for species trees and networks under the multispecies coalescent model in R
Bioinformatics
2020-10-08Paper
Inferring metric trees from weighted quartets via an intertaxon distance
Bulletin of Mathematical Biology
2020-08-12Paper
Inferring Metric Trees from Weighted Quartets via an Intertaxon Distance
Bulletin of Mathematical Biology
2020-07-01Paper
Gene tree discord, simplex plots, and statistical tests under the coalescent2020-02-13Paper
NANUQ: a method for inferring species networks from gene trees under the coalescent model
Algorithms for Molecular Biology
2019-12-01Paper
Hypothesis testing near singularities and boundaries
Electronic Journal of Statistics
2019-08-06Paper
Hypothesis testing near singularities and boundaries
Electronic Journal of Statistics
2019-08-06Paper
Species Tree Inference from Genomic Sequences Using the Log-Det Distance
SIAM Journal on Applied Algebra and Geometry
2019-05-08Paper
Estimating trees from filtered data: identifiability of models for morphological phylogenetics
Journal of Theoretical Biology
2019-02-04Paper
Hypothesis testing near singularities and boundaries
Electronic Journal of Statistics
2019-01-01Paper
Hypothesis testing near singularities and boundaries
Electronic Journal of Statistics
2019-01-01Paper
Phylogenetics2018-10-09Paper
Determining species tree topologies from clade probabilities under the coalescent
Journal of Theoretical Biology
2018-09-24Paper
Split probabilities and species tree inference under the multispecies coalescent model
Bulletin of Mathematical Biology
2018-03-21Paper
Split probabilities and species tree inference under the multispecies coalescent model
Bulletin of Mathematical Biology
2018-03-21Paper
Phylogenetic trees and Euclidean embeddings
Journal of Mathematical Biology
2017-01-25Paper
There are no caterpillars in a wicked forest
Theoretical Population Biology
2016-08-03Paper
Tensors of nonnegative rank two
Linear Algebra and its Applications
2015-05-06Paper
A semialgebraic description of the general Markov model on phylogenetic trees
SIAM Journal on Discrete Mathematics
2014-09-26Paper
Parameter identifiability of discrete Bayesian networks with hidden variables2014-06-02Paper
Tensor rank, invariants, inequalities, and applications
SIAM Journal on Matrix Analysis and Applications
2013-12-13Paper
Identifiability of large phylogenetic mixture models
Bulletin of Mathematical Biology
2012-05-14Paper
Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent
Journal of Mathematical Biology
2012-02-09Paper
Trees, Fast and Accurate
Science
2011-11-30Paper
Parameter identifiability in a class of random graph mixture models
Journal of Statistical Planning and Inference
2011-03-08Paper
A concise proof of Kruskal's theorem on tensor decomposition
Linear Algebra and its Applications
2010-03-01Paper
Identifiability of parameters in latent structure models with many observed variables
The Annals of Statistics
2009-12-09Paper
Identifiability of 2-tree mixtures for group-based models2009-09-09Paper
Identifiability of a Markovian model of molecular evolution with gamma-distributed rates
Advances in Applied Probability
2008-05-15Paper
Identifying evolutionary trees and substitution parameters for the general Markov model with invariable sites
Mathematical Biosciences
2008-03-12Paper
scientific article; zbMATH DE number 5247137 (Why is no real title available?)2008-03-11Paper
Phylogenetic ideals and varieties for the general Markov model
Advances in Applied Mathematics
2008-03-05Paper
Phylogenetic invariants for stationary base composition
Journal of Symbolic Computation
2007-10-23Paper
scientific article; zbMATH DE number 2220791 (Why is no real title available?)
Applied Mathematics Research eXpress
2005-10-31Paper
Relativistic velocity space, Wigner rotation and Thomas precession2005-01-24Paper
Hecke operators for GLnand buildings
Acta Arithmetica
2004-08-18Paper
Mathematical Models in Biology2004-02-12Paper
Rationality theorems for Hecke operators on GL\(_n\).
Journal of Number Theory
2004-01-12Paper
Phylogenetic invariants for the general Markov model of sequence mutation
Mathematical Biosciences
2004-01-06Paper
Automorphic forms, definite quaternion algebras, and Atkin-Lehner theory on trees
Journal of Number Theory
2002-06-18Paper
The theta multiplier for number fields via \(p\)-adic planes
Pacific Journal of Mathematics
1997-07-24Paper
p-Adic Hyperbolic Planes and Modular Forms
Transactions of the American Mathematical Society
1995-09-27Paper
Sequences of metrics on compact Riemann surfaces
Duke Mathematical Journal
1994-11-01Paper
The identifiability of tree topology for phylogenetic models, including covarion and mixture models
(available as arXiv preprint)
N/APaper
Identifying circular orders for blobs in phylogenetic networks
(available as arXiv preprint)
N/APaper


Research outcomes over time


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