Split probabilities and species tree inference under the multispecies coalescent model

DOI10.1007/s11538-017-0363-5zbMath1385.92035arXiv1704.04268OpenAlexW2606148765WikidataQ46263501 ScholiaQ46263501MaRDI QIDQ1706278

James H. Degnan, John A. Rhodes, Elizabeth S. Allman

Publication date: 21 March 2018

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1704.04268

zbMATH Keywords

multispecies coalescent modelspecies tree identifiabilitysplit probability

Mathematics Subject Classification ID

Problems related to evolution (92D15) Genetics and epigenetics (92D10)

Related Items (2)

Preface. Algebraic methods in phylogenetics ⋮ Optimal Completion of Incomplete Gene Trees in Polynomial Time Using OCTAL

Uses Software

• SINGULAR
• MrBayes
• ASTRAL-II
• STEM-hy
• BUCKy
• ASTRID

Cites Work

• Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent
• Identifiability and reconstructibility of species phylogenies under a modified coalescent
• Determining species tree topologies from clade probabilities under the coalescent
• Identifiability of the unrooted species tree topology under the coalescent model with time-reversible substitution processes, site-specific rate variation, and invariable sites
• Unnamed Item

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